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[ Källkod: htseq  ]

Paket: python-htseq (0.6.1p1-4build1)

high-throughput genome sequencing read analysis utilities

HTSeq can be used to performing a number of common analysis tasks when working with high-throughput genome sequencing reads: 

  * Getting statistical summaries about the base-call quality scores to
    study the data quality.
  * Calculating a coverage vector and exporting it for visualization in
    a genome browser.
  * Reading in annotation data from a GFF file.
  * Assigning aligned reads from an RNA-Seq experiments to exons and
    genes.

Andra paket besläktade med python-htseq

  • beror
  • rekommenderar
  • föreslår
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    också ett virtuellt paket som tillhandahålls av libc6-udeb
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3
  • dep: python
    interactive high-level object-oriented language (default version)
    dep: python (<< 2.8)
    dep: python (>= 2.7)
  • dep: python-numpy (>= 1:1.10.0~b1)
    Numerical Python adds a fast array facility to the Python language
  • dep: python-numpy-abi9
    virtuellt paket som tillhandahålls av python-numpy

Hämta python-htseq

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Arkitektur Paketstorlek Installerad storlek Filer
amd64 198,2 kbyte690 kbyte [filförteckning]