[ aramo ]
[ Källkod: tiddit ]
Paket: tiddit (2.12.2+dfsg-1build1)
Länkar för tiddit
Trisquelresurser:
Hämta källkodspaketet tiddit:
- [tiddit_2.12.2+dfsg-1build1.dsc]
- [tiddit_2.12.2+dfsg.orig.tar.xz]
- [tiddit_2.12.2+dfsg-1build1.debian.tar.xz]
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Andreas Tille
Externa resurser:
- Hemsida [github.com]
Liknande paket:
structural variant calling
TIDDIT is a tool to used to identify chromosomal rearrangements using Mate Pair or Paired End sequencing data. TIDDIT identifies intra and inter- chromosomal translocations, deletions, tandem-duplications and inversions, using supplementary alignments as well as discordant pairs.
TIDDIT has two analysis modules. The sv mode, which is used to search for structural variants. And the cov mode that analyse the read depth of a bam file and generates a coverage report.
Andra paket besläktade med tiddit
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- dep: libbamtools2.5.1 (>= 2.5.1+dfsg)
- dynamic library for manipulating BAM (genome alignment) files
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
också ett virtuellt paket som tillhandahålls av libc6-udeb
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- dep: libgcc-s1 (>= 3.3.1) [ej armhf]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.11)
- dep: python3 (>= 3.10~)
Hämta tiddit
| Arkitektur | Paketstorlek | Installerad storlek | Filer |
|---|---|---|---|
| amd64 | 257,0 kbyte | 1015 kbyte | [filförteckning] |
| arm64 | 234,5 kbyte | 802 kbyte | [filförteckning] |
| armhf | 241,3 kbyte | 573 kbyte | [filförteckning] |
| ppc64el | 291,2 kbyte | 1359 kbyte | [filförteckning] |