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Paket: vt (0.57721+ds-3)

toolset for short variant discovery in genetic sequence data

vt is a variant tool set that discovers short variants from Next Generation Sequencing data.

Vt-normalize is a tool to normalize representation of genetic variants in the VCF. Variant normalization is formally defined as the consistent representation of genetic variants in an unambiguous and concise way. In vt a simple general algorithm to enforce this is implemented.

Andra paket besläktade med vt

  • beror
  • rekommenderar
  • föreslår
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    också ett virtuellt paket som tillhandahålls av libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [ej armhf]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libhts3 (>= 1.10)
    C library for high-throughput sequencing data formats
  • dep: libpcre2-8-0 (>= 10.22)
    New Perl Compatible Regular Expression Library- 8 bit runtime files
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: r-base-core
    GNU R core of statistical computation and graphics system

Hämta vt

Hämtningar för alla tillgängliga arkitekturer
Arkitektur Paketstorlek Installerad storlek Filer
amd64 758,2 kbyte2613 kbyte [filförteckning]
arm64 625,4 kbyte2241 kbyte [filförteckning]
armhf 624,4 kbyte1524 kbyte [filförteckning]
ppc64el 688,9 kbyte2833 kbyte [filförteckning]