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[ Källkod: r-bioc-variantannotation  ]

Länkar för r-bioc-variantannotation

Trisquelresurser:

• Install using apturl
• Entry at directory.fsf.org
• Felrapporter
• Changelog
• Upphovsrättsfil

Hämta källkodspaketet r-bioc-variantannotation:

• [r-bioc-variantannotation_1.40.0-1.dsc]
• [r-bioc-variantannotation_1.40.0.orig.tar.gz]
• [r-bioc-variantannotation_1.40.0-1.debian.tar.xz]

Ansvarig:

• Debian R Packages Maintainers

Original Maintainers:

• Debian R Packages Maintainers
• Andreas Tille

Externa resurser:

• Hemsida [bioconductor.org]

Liknande paket:

• snpeff
• r-bioc-annotationdbi
• r-bioc-annotate
• r-bioc-org.hs.eg.db
• r-bioc-go.db
• r-bioc-snpstats
• vt-examples
• vt
• r-bioc-affy
• r-bioc-qtlizer
• python3-geneimpacts

Andra paket besläktade med r-bioc-variantannotation

beror

rekommenderar

föreslår

• dep: libc6 (>= 2.34)

  GNU C Library: Shared libraries
  också ett virtuellt paket som tillhandahålls av libc6-udeb

• dep: libcurl4 (>= 7.18.0)

  easy-to-use client-side URL transfer library (OpenSSL flavour)

• dep: r-api-4.0

  virtuellt paket som tillhandahålls av r-base-core

• dep: r-api-bioc-3.14

  virtuellt paket som tillhandahålls av r-bioc-biocgenerics

• dep: r-base-core (>= 4.1.2-1ubuntu1)

  GNU R core of statistical computation and graphics system

• dep: r-bioc-annotationdbi (>= 1.27.9)

  GNU R Annotation Database Interface for BioConductor

• dep: r-bioc-biobase

  base functions for Bioconductor

• dep: r-bioc-biocgenerics (>= 0.37.0)

  generic functions for Bioconductor

• dep: r-bioc-biostrings (>= 2.57.2)

  GNU R string objects representing biological sequences

• dep: r-bioc-bsgenome (>= 1.47.3)

  BioConductor infrastructure for Biostrings-based genome data packages

• dep: r-bioc-genomeinfodb (>= 1.15.2)

  BioConductor utilities for manipulating chromosome identifiers

• dep: r-bioc-genomicfeatures (>= 1.31.3)

  GNU R tools for making and manipulating transcript centric annotations

• dep: r-bioc-genomicranges (>= 1.41.5)

  BioConductor representation and manipulation of genomic intervals

• dep: r-bioc-iranges (>= 2.23.9)

  GNU R low-level containers for storing sets of integer ranges

• dep: r-bioc-matrixgenerics

  S4 Generic Summary Statistic Functions that Operate on Matrix-Like Objects

• dep: r-bioc-rhtslib

  HTSlib high-throughput sequencing library as GNU R package

• dep: r-bioc-rsamtools (>= 1.99.0)

  GNU R binary alignment (BAM), variant call (BCF), or tabix file import

• dep: r-bioc-rtracklayer (>= 1.39.7)

  GNU R interface to genome browsers and their annotation tracks

• dep: r-bioc-s4vectors (>= 0.27.12)

  BioConductor S4 implementation of vectors and lists

• dep: r-bioc-summarizedexperiment (>= 1.19.5)

  BioConductor assay container

• dep: r-bioc-xvector (>= 0.29.2)

  BioConductor representation and manpulation of external sequences

• dep: r-bioc-zlibbioc

  (Virtual) zlibbioc Bioconductor package

• dep: r-cran-dbi

  GNU R package providing a generic database interface

• sug: r-bioc-annotationhub

  GNU R client to access AnnotationHub resources

• sug: r-bioc-biocstyle

  standard styles for vignettes and other Bioconductor documents

• sug: r-bioc-snpstats

  BioConductor SnpMatrix and XSnpMatrix classes and methods

• sug: r-cran-ggplot2

  implementation of the Grammar of Graphics

• sug: r-cran-runit

  GNU R package providing unit testing framework

Hämta r-bioc-variantannotation

Hämtningar för alla tillgängliga arkitekturer

Arkitektur	Paketstorlek	Installerad storlek	Filer
amd64	3.430,7 kbyte	4828 kbyte	[filförteckning]
arm64	3.429,9 kbyte	4796 kbyte	[filförteckning]
armhf	3.403,7 kbyte	4615 kbyte	[filförteckning]
ppc64el	3.500,2 kbyte	5120 kbyte	[filförteckning]