Paket: bio-vcf (0.9.5-3)
Länkar för bio-vcf
Trisquelresurser:
Hämta källkodspaketet bio-vcf:
Ansvarig:
Original Maintainers:
- Debian Med Packaging Team (E-postarkiv)
- Andreas Tille
- Nilesh Patra
Externa resurser:
- Hemsida [github.com]
Liknande paket:
domain specific language (DSL) for processing the VCF format
Bio-vcf provides a domain specific language (DSL) for processing the VCF format. Record named fields can be queried with regular expressions, e.g.
sample.dp>20 and rec.filter !~ /LowQD/ and rec.tumor.bcount[rec.alt]>4
Bio-vcf is a new generation VCF parser, filter and converter. Bio-vcf is not only very fast for genome-wide (WGS) data, it also comes with a really nice filtering, evaluation and rewrite language and it can output any type of textual data, including VCF header and contents in RDF and JSON.
Andra paket besläktade med bio-vcf
|
|
|
-
- dep: ruby
- Interpreter of object-oriented scripting language Ruby (default version)
Hämta bio-vcf
Arkitektur | Paketstorlek | Installerad storlek | Filer |
---|---|---|---|
all | 29,2 kbyte | 141 kbyte | [filförteckning] |