Skip to content
Sections
>> Trisquel >> Packages >> aramo >> Source >> misc >> unicycler
nabia  ] [  aramo  ]

Source Package: unicycler (0.4.8+dfsg-2build1)

Links for unicycler

Trisquel Resources:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Andreas Tille
  • Liubov Chuprikova

External Resources:

The following binary packages are built from this source package:
unicycler
hybrid assembly pipeline for bacterial genomes
unicycler-data
hybrid assembly pipeline for bacterial genomes (data package)

Other Packages Related to unicycler

  • build-depends
  • build-depends-indep
  • adep: debhelper-compat (= 12)
    Package not available
  • adep: dh-python
    Debian helper tools for packaging Python libraries and applications
  • adep: python3-all
    package depending on all supported Python 3 runtime versions
  • adep: python3-setuptools
    Python3 Distutils Enhancements
  • adep: default-jdk
    Standard Java or Java compatible Development Kit
  • adep: bcftools
    genomic variant calling and manipulation of VCF/BCF files
  • adep: bowtie2
    ultrafast memory-efficient short read aligner
  • adep: miniasm
    ultrafast de novo assembler for long noisy DNA sequencing reads
  • adep: ncbi-blast+
    next generation suite of BLAST sequence search tools
  • adep: pilon
    automated genome assembly improvement and variant detection tool
  • adep: racon
    consensus module for raw de novo DNA assembly of long uncorrected reads
  • adep: samtools
    processing sequence alignments in SAM, BAM and CRAM formats
  • adep: spades (>= 3.13.1)
    genome assembler for single-cell and isolates data sets
  • adep: libseqan2-dev
    C++ library for the analysis of biological sequences (development)
  • adep: zlib1g-dev
    compression library - development

Download unicycler

FileSize (in kB)MD5 checksum
unicycler_0.4.8+dfsg-2build1.dsc 2.3 kB 67c00c150c3e2e9e4d679799b112a203
unicycler_0.4.8+dfsg.orig.tar.xz 14,295.2 kB b3990233cfbb19b66c6caa68c564953b
unicycler_0.4.8+dfsg-2build1.debian.tar.xz 11.4 kB 83720873dcfe1e5abaad73f1d23953ee
Debian Package Source Repository (VCS: Git)
https://salsa.debian.org/med-team/unicycler.git
Debian Package Source Repository (Browsable)
https://salsa.debian.org/med-team/unicycler