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Zdrojový balík: ariba (2.14.6+ds-3build1)

Odkazy pre ariba

Zdroje Trisquel:

Správca:

Original Maintainers:

  • Debian Med Packaging Team (Konferencia)
  • Sascha Steinbiss

Externé zdroje:

Nasledovné binárne balíky sú zostavované z tohto zdrojového balíka:
ariba
Antibiotic Resistance Identification By Assembly

Ostatné balíky súvisiace s balíkom ariba

  • build-depends
  • build-depends-indep
  • adep: debhelper-compat (= 13)
    Balík nie je dostupný
  • adep: dh-python
    Debian helper tools for packaging Python libraries and applications
  • adep: python3-biopython
    Python3 library for bioinformatics
  • adep: python3-all-dev
    package depending on all supported Python 3 development packages
  • adep: python3-dendropy
    DendroPy Phylogenetic Computing Library (Python 3)
  • adep: python3-setuptools
    Python3 Distutils Enhancements
  • adep: python3-pymummer (>= 0.10.2)
    Python 3 interface to MUMmer
  • adep: python3-pysam (>= 0.9.1)
    interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  • adep: python3-pytest
    Simple, powerful testing in Python3
  • adep: python3-bs4
    error-tolerant HTML parser for Python 3
  • adep: python3-matplotlib
    Python based plotting system in a style similar to Matlab (Python 3)
  • adep: python3-tk
    Tkinter - Writing Tk applications with Python 3.x
  • adep: bowtie2 (>= 2.1.0)
    ultrafast memory-efficient short read aligner
  • adep: cd-hit
    suite of programs designed to quickly group sequences
  • adep: mash
    fast genome and metagenome distance estimation using MinHash
  • adep: libminimap-dev
    development headers for libminimap
  • adep: libfml-dev (>= 0.1-4~)
    development headers for libfml
  • adep: mummer
    Efficient sequence alignment of full genomes
  • adep: fastaq (>= 3.12.0)
    FASTA and FASTQ file manipulation tools
  • adep: help2man
    Automatic manpage generator
  • adep: asciidoctor
    AsciiDoc to HTML rendering for Ruby
  • adep: spades [amd64]
    genome assembler for single-cell and isolates data sets

Download ariba

SúborVeľkosť (v kB)kontrolný súčet MD5
ariba_2.14.6+ds-3build1.dsc 2.3 kB 0c39cb920b01372a0827e175aab91a19
ariba_2.14.6+ds.orig.tar.xz 1,924.3 kB 908a550cb2c7683a271f16aee3f079ad
ariba_2.14.6+ds-3build1.debian.tar.xz 9.7 kB 3b3222cc8149e2a707e2274c04a8acd9
Úložisko zdrojových balíkov Debianu (VCS: Git)
https://salsa.debian.org/med-team/ariba.git
Úložisko zdrojových balíkov Debianu (možno prezerať)
https://salsa.debian.org/med-team/ariba