[ aramo ]
[ Zdroj: umis ]
Balík: umis (1.0.8-1build1)
Odkazy pre umis
Zdroje Trisquel:
Stiahnuť zdrojový balík umis:
Správca:
Original Maintainers:
- Debian Med Packaging Team (Konferencia)
- Andreas Tille
Externé zdroje:
- Domovská stránka [github.com]
Podobné balíky:
tools for processing UMI RNA-tag data
Umis provides tools for estimating expression in RNA-Seq data which performs sequencing of end tags of transcript, and incorporate molecular tags to correct for amplification bias.
There are four steps in this process.
1. Formatting reads 2. Filtering noisy cellular barcodes 3. Pseudo-mapping to cDNAs 4. Counting molecular identifiers
Ostatné balíky súvisiace s balíkom umis
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- dep: libc6 (>= 2.17) [arm64, ppc64el]
- GNU C Library: Shared libraries
tiež virtuálny balík poskytovaný balíkom libc6-udeb
- dep: libc6 (>= 2.4) [amd64, armhf]
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.11)
- dep: python3 (>= 3.10~)
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- dep: python3-click
- Wrapper around optparse for command line utilities - Python 3.x
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- dep: python3-pandas
- data structures for "relational" or "labeled" data
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- dep: python3-pysam
- interface for the SAM/BAM sequence alignment and mapping format (Python 3)
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- dep: python3-regex
- alternative regular expression module (Python 3)
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-toolz
- List processing tools and functional utilities
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- sug: umis-examples
- tools for processing UMI RNA-tag data (examples)
Stiahnuť umis
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| amd64 | 24.9 kB | 110 kB | [zoznam súborov] |
| arm64 | 24.6 kB | 106 kB | [zoznam súborov] |
| armhf | 24.0 kB | 101 kB | [zoznam súborov] |
| ppc64el | 25.3 kB | 154 kB | [zoznam súborov] |