Balík: changeo (1.2.0-1)
Odkazy pre changeo
Zdroje Trisquel:
Stiahnuť zdrojový balík changeo:
- [changeo_1.2.0-1.dsc]
- [changeo_1.2.0.orig-debian-tests-data.tar.gz]
- [changeo_1.2.0.orig.tar.gz]
- [changeo_1.2.0-1.debian.tar.xz]
Správca:
Original Maintainers:
- Debian Med Packaging Team (Konferencia)
- Steffen Moeller
- Nilesh Patra
Externé zdroje:
- Domovská stránka [changeo.readthedocs.io]
Podobné balíky:
Repertoire clonal assignment toolkit (Python 3)
Change-O is a collection of tools for processing the output of V(D)J alignment tools, assigning clonal clusters to immunoglobulin (Ig) sequences, and reconstructing germline sequences.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of Ig repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. Change-O is a suite of utilities to facilitate advanced analysis of Ig and TCR sequences following germline segment assignment. Change-O handles output from IMGT/HighV-QUEST and IgBLAST, and provides a wide variety of clustering methods for assigning clonal groups to Ig sequences. Record sorting, grouping, and various database manipulation operations are also included.
This package installs the library for Python 3.
Ostatné balíky súvisiace s balíkom changeo
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-airr
- Data Representation Standard library for antibody and TCR sequences
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-numpy
- Fast array facility to the Python 3 language
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- dep: python3-pandas
- data structures for "relational" or "labeled" data
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- dep: python3-pkg-resources
- Package Discovery and Resource Access using pkg_resources
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- dep: python3-presto
- toolkit for processing B and T cell sequences (Python3 module)
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: python3-yaml
- YAML parser and emitter for Python3
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- rec: python3-presto (>= 0.6.2)
- toolkit for processing B and T cell sequences (Python3 module)
Stiahnuť changeo
| Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
|---|---|---|---|
| all | 111.0 kB | 693 kB | [zoznam súborov] |