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Balík: macs (2.2.7.1-5ubuntu1)

Model-based Analysis of ChIP-Seq on short reads sequencers

MACS empirically models the length of the sequenced ChIP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. MACS compares favorably to existing ChIP-Seq peak-finding algorithms, is publicly available open source, and can be used for ChIP-Seq with or without control samples.

Ostatné balíky súvisiace s balíkom macs

  • závisí
  • odporúča
  • navrhuje
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    tiež virtuálny balík poskytovaný balíkom libc6-udeb
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
    dep: python3 (<< 3.11)
    dep: python3 (>= 3.10~)
  • dep: python3-numpy
    Fast array facility to the Python 3 language

Stiahnuť macs

Stiahnuť pre všetky dostupné architektúry
Architektúra Veľkosť balíka Nainštalovaná veľkosť Súbory
amd64 2,533.2 kB5664 kB [zoznam súborov]
arm64 2,464.1 kB5252 kB [zoznam súborov]
armhf 2,475.2 kB4160 kB [zoznam súborov]
ppc64el 2,543.5 kB6581 kB [zoznam súborov]