Balík: chromhmm (1.23+dfsg-1)
Odkazy pre chromhmm
Zdroje Trisquel:
Stiahnuť zdrojový balík chromhmm:
Správca:
Original Maintainers:
- Debian Med Packaging Team (Konferencia)
- Dylan Aïssi
Externé zdroje:
- Domovská stránka [compbio.mit.edu]
Podobné balíky:
Chromatin state discovery and characterization
ChromHMM is software for learning and characterizing chromatin states. ChromHMM can integrate multiple chromatin datasets such as ChIP-seq data of various histone modifications to discover de novo the major re-occuring combinatorial and spatial patterns of marks. ChromHMM is based on a multivariate Hidden Markov Model that explicitly models the presence or absence of each chromatin mark. The resulting model can then be used to systematically annotate a genome in one or more cell types. By automatically computing state enrichments for large-scale functional and annotation datasets ChromHMM facilitates the biological characterization of each state. ChromHMM also produces files with genome-wide maps of chromatin state annotations that can be directly visualized in a genome browser.
Ostatné balíky súvisiace s balíkom chromhmm
|
|
|
-
- dep: default-jre
- Standard Java or Java compatible Runtime
- alebo java7-runtime
- virtuálny balík poskytovaný balíkom default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-18-jre, openjdk-8-jre
- alebo java8-runtime
- virtuálny balík poskytovaný balíkom default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-18-jre, openjdk-8-jre
- alebo java9-runtime
- virtuálny balík poskytovaný balíkom default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-18-jre
- alebo java10-runtime
- virtuálny balík poskytovaný balíkom default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-18-jre
- alebo java11-runtime
- virtuálny balík poskytovaný balíkom default-jre, openjdk-11-jre, openjdk-17-jre, openjdk-18-jre
-
- dep: libbatik-java
- xml.apache.org SVG Library
-
- dep: libhtsjdk-java
- Java API for high-throughput sequencing data (HTS) formats
-
- dep: libjheatchart-java
- Heat map charting library for Java
Stiahnuť chromhmm
Architektúra | Veľkosť balíka | Nainštalovaná veľkosť | Súbory |
---|---|---|---|
all | 181.7 kB | 204 kB | [zoznam súborov] |