Пакет: python3-presto (0.7.2-1)
Ссылки для python3-presto
Ресурсы Trisquel:
Исходный код presto:
Сопровождающий:
Original Maintainers:
- Debian Med Packaging Team (Почтовый архив)
- Steffen Moeller
Внешние ресурсы:
- Сайт [presto.readthedocs.io]
Подобные пакеты:
toolkit for processing B and T cell sequences (Python3 module)
pRESTO is a toolkit for processing raw reads from high-throughput sequencing of B cell and T cell repertoires.
Dramatic improvements in high-throughput sequencing technologies now enable large-scale characterization of lymphocyte repertoires, defined as the collection of trans-membrane antigen-receptor proteins located on the surface of B cells and T cells. The REpertoire Sequencing TOolkit (pRESTO) is composed of a suite of utilities to handle all stages of sequence processing prior to germline segment assignment. pRESTO is designed to handle either single reads or paired-end reads. It includes features for quality control, primer masking, annotation of reads with sequence embedded barcodes, generation of unique molecular identifier (UMI) consensus sequences, assembly of paired-end reads and identification of duplicate sequences. Numerous options for sequence sorting, sampling and conversion operations are also included.
This package provides the presto Python3 module.
Другие пакеты, относящиеся к python3-presto
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- dep: cd-hit
- suite of programs designed to quickly group sequences
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- dep: ncbi-blast+
- next generation suite of BLAST sequence search tools
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-biopython
- Python3 library for bioinformatics
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- dep: python3-numpy
- Fast array facility to the Python language (Python 3)
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- dep: python3-packaging
- core utilities for python3 packages
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- dep: python3-pandas
- data structures for "relational" or "labeled" data
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- dep: python3-scipy
- scientific tools for Python 3
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- dep: vsearch [не armhf, riscv64]
- tool for processing metagenomic sequences
Загрузка python3-presto
| Архитектура | Размер пакета | В установленном виде | Файлы |
|---|---|---|---|
| amd64 | 78,8 Кб | 513 Кб | [список файлов] |
| arm64 | 78,8 Кб | 513 Кб | [список файлов] |
| armhf | 78,8 Кб | 513 Кб | [список файлов] |
| ppc64el | 78,8 Кб | 513 Кб | [список файлов] |
| riscv64 | 45,3 Кб | 219 Кб | [список файлов] |