Skip to content
Sections
>> Trisquel >> Pakiety >> nabia >> science >> ncbi-blast+
etiona  ] [  nabia  ] [  aramo  ]
[ Pakiet źródłowy: ncbi-blast+  ]

Pakiet: ncbi-blast+ (2.9.0-2)

next generation suite of BLAST sequence search tools

The Basic Local Alignment Search Tool (BLAST) is the most widely used sequence similarity tool. There are versions of BLAST that compare protein queries to protein databases, nucleotide queries to nucleotide databases, as well as versions that translate nucleotide queries or databases in all six frames and compare to protein databases or queries. PSI-BLAST produces a position-specific-scoring-matrix (PSSM) starting with a protein query, and then uses that PSSM to perform further searches. It is also possible to compare a protein or nucleotide query to a database of PSSM’s. The NCBI supports a BLAST web page at blast.ncbi.nlm.nih.gov as well as a network service.

Inne pakiety związane z ncbi-blast+

  • wymaga
  • poleca
  • sugeruje
  • dep: libbz2-1.0
    high-quality block-sorting file compressor library - runtime
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    również pakiet wirtualny udostępniany przez libc6-udeb
  • dep: libgcc1 (>= 1:3.0) [amd64]
    GCC support library (dependency package)
    dep: libgcc1 (>= 1:3.5) [armhf]
  • dep: libgomp1 (>= 6)
    GCC OpenMP (GOMP) support library
  • dep: liblmdb0 (>= 0.9.7)
    Lightning Memory-Mapped Database shared library
  • dep: libmbedcrypto3 (>= 2.13)
    lightweight crypto and SSL/TLS library - crypto library
  • dep: libmbedtls12 (>= 2.13)
    lightweight crypto and SSL/TLS library - tls library
  • dep: libpcre3
    Old Perl 5 Compatible Regular Expression Library - runtime files
  • dep: libstdc++6 (>= 9)
    GNU Standard C++ Library v3
  • dep: ncbi-data
    Platform-independent data for the NCBI toolkit
  • dep: perl
    Larry Wall's Practical Extraction and Report Language
  • dep: python3
    interactive high-level object-oriented language (default python3 version)
  • dep: zlib1g (>= 1:1.2.11)
    compression library - runtime
  • enh: t-coffee
    Multiple Sequence Alignment

Pobieranie ncbi-blast+

Pobierz dla wszystkich dostępnych architektur
Architektura Rozmiar pakietu Rozmiar po instalacji Pliki
amd64 10 813,4 KiB47566 KiB [lista plików]
armhf 9 216,7 KiB31165 KiB [lista plików]