Pakiet: sumatra (1.0.36+ds-1)
Odnośniki dla sumatra
Zasoby systemu Trisquel:
- Install using apturl
- Entry at directory.fsf.org
- Raporty o błędach
- Changelog
- Informacje nt. praw autorskich
Pobieranie pakietu źródłowego sumatra:
Opiekun:
Original Maintainers:
- Debian Med Packaging Team (Archiwum e-mail)
- Tim Booth
- Andreas Tille
- Pierre Gruet
Zasoby zewnętrzne:
- Strona internetowa [metabarcoding.org]
Podobne pakiety:
fast and exact comparison and clustering of sequences
With the development of next-generation sequencing, efficient tools are needed to handle millions of sequences in reasonable amounts of time. Sumatra is a program developed by the LECA. Sumatra aims to compare sequences in a way that is fast and exact at the same time. This tool has been developed to be adapted to the type of data generated by DNA metabarcoding, i.e. entirely sequenced, short markers. Sumatra computes the pairwise alignment scores from one dataset or between two datasets, with the possibility to specify a similarity threshold under which pairs of sequences that have a lower similarity are not reported. The output can then go through a classification process with programs such as MCL or MOTHUR.
Inne pakiety związane z sumatra
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- dep: libc6 (>= 2.17) [arm64, ppc64el]
- GNU C Library: Shared libraries
również pakiet wirtualny udostępniany przez libc6-udeb
- dep: libc6 (>= 2.7) [amd64, armhf]
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- dep: libsuma1 (>= 1.0.35)
- shared library for sumatra and sumaclust
Pobieranie sumatra
| Architektura | Rozmiar pakietu | Rozmiar po instalacji | Pliki |
|---|---|---|---|
| amd64 | 78,6 KiB | 136 KiB | [lista plików] |
| arm64 | 77,8 KiB | 131 KiB | [lista plików] |
| armhf | 78,2 KiB | 127 KiB | [lista plików] |
| ppc64el | 78,9 KiB | 176 KiB | [lista plików] |