Skip to content
Sections
>> Trisquel >> Pakiety >> aramo >> gnu-r >> r-bioc-dnacopy
etiona  ] [  nabia  ] [  aramo  ]
[ Pakiet źródłowy: r-bioc-dnacopy  ]

Pakiet: r-bioc-dnacopy (1.68.0-1)

R package: DNA copy number data analysis

Implements the circular binary segmentation (CBS) algorithm to segment DNA copy number data and identify genomic regions with abnormal copy number.

This package is for analyzing array DNA copy number data, which is usually (but not always) called array Comparative Genomic Hybridization (array CGH) data It implements a methodology for finding change-points in these data which are points after which the (log) test over reference ratios have changed location. This model is that the change-points correspond to positions where the underlying DNA copy number has changed. Therefore, change-points can be used to identify regions of gained and lost copy number. Also provided is a function for making relevant plots of these data.

Inne pakiety związane z r-bioc-dnacopy

  • wymaga
  • poleca
  • sugeruje

Pobieranie r-bioc-dnacopy

Pobierz dla wszystkich dostępnych architektur
Architektura Rozmiar pakietu Rozmiar po instalacji Pliki
amd64 397,6 KiB511 KiB [lista plików]
arm64 396,6 KiB502 KiB [lista plików]
armhf 394,6 KiB494 KiB [lista plików]
ppc64el 402,4 KiB531 KiB [lista plików]