Pakiet: libvcflib-tools (1.0.3+dfsg-1)

Odnośniki dla libvcflib-tools

Zasoby systemu Trisquel:

Pobieranie pakietu źródłowego libvcflib:

Opiekun:

Debian Med Packaging Team (Archiwum e-mail)

Original Maintainers:

Debian Med Packaging Team (Archiwum e-mail)
Andreas Tille

Zasoby zewnętrzne:

Strona internetowa [github.com]

Podobne pakiety:

C++ library for parsing and manipulating VCF files (tools)

The Variant Call Format (VCF) is a flat-file, tab-delimited textual format intended to concisely describe reference-indexed variations between individuals. VCF provides a common interchange format for the description of variation in individuals and populations of samples, and has become the defacto standard reporting format for a wide array of genomic variant detectors.

vcflib provides methods to manipulate and interpret sequence variation as it can be described by VCF. It is both:

 * an API for parsing and operating on records of genomic variation as it can
   be described by the VCF format,
 * and a collection of command-line utilities for executing complex
   manipulations on VCF files.

This package contains several tools using the library.

Inne pakiety związane z libvcflib-tools

wymaga

poleca

sugeruje

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
również pakiet wirtualny udostępniany przez libc6-udeb
dep: libdisorder0 (>= 0.0.2)

library for entropy measurement of byte streams
dep: libfastahack0 (>= 0.0+git20160702.bbc645f) [nie armhf]

library for indexing and sequence extraction from FASTA files (lib)

dep: libfastahack0 (>= 1.0.0+dfsg) [armhf]
dep: libgcc-s1 (>= 3.3.1) [amd64, arm64]

GCC support library

dep: libgcc-s1 (>= 3.4.4) [ppc64el]

dep: libgcc-s1 (>= 3.5) [armhf]
dep: libsmithwaterman0 (>= 0.0+git20160702.2610e25)

determine similar regions between two strings or genomic sequences (lib)
dep: libstdc++6 (>= 11)

GNU Standard C++ Library v3
dep: libtabixpp0 (>= 1.0.0)

C++ wrapper to tabix indexer
dep: libvcflib1 (>= 1.0.3+dfsg)

C++ library for parsing and manipulating VCF files
dep: python3

interactive high-level object-oriented language (default python3 version)
dep: r-base-core

GNU R core of statistical computation and graphics system
dep: r-cran-ggplot2

implementation of the Grammar of Graphics
dep: r-cran-gridbase

GNU R Integration of base and grid graphics
dep: r-cran-plyr

tools for splitting, applying and combining data

sug: r-cran-pracma

practical numerical math functions for GNU R

Pobieranie libvcflib-tools

Pobierz dla wszystkich dostępnych architektur
Architektura	Rozmiar pakietu	Rozmiar po instalacji	Pliki
amd64	721,4 KiB	4397 KiB	[lista plików]
arm64	687,9 KiB	3624 KiB	[lista plików]
armhf	705,1 KiB	3111 KiB	[lista plików]
ppc64el	747,0 KiB	6820 KiB	[lista plików]

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