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Pakket: r-cran-tfmpvalue (0.0.8-1build1)

GNU R P-Value Computation for Position Weight Matrices

In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, it is interesting to obtain the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. This package is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15.

Andere aan r-cran-tfmpvalue gerelateerde pakketten

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    Ook een virtueel pakket geboden door: libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [amd64]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: r-api-3.5
    virtueel pakket geboden door r-base-core
  • dep: r-base-core (>= 3.6.2.20200221-1build1)
    GNU R core of statistical computation and graphics system
  • dep: r-cran-rcpp (>= 0.11.1)
    GNU R package for Seamless R and C++ Integration

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Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 53,3 kB162 kB [overzicht]
armhf 50,4 kB125 kB [overzicht]