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Pakket: smithwaterman (0.0+20160702-3)

determine similar regions between two strings or genomic sequences

The Smith–Waterman algorithm performs local sequence alignment; that is, for determining similar regions between two strings or nucleotide or protein sequences. Instead of looking at the total sequence, the Smith–Waterman algorithm compares segments of all possible lengths and optimizes the similarity measure.

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  • depends
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  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    Ook een virtueel pakket geboden door: libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libdisorder0 (>= 0.0.2)
    library for entropy measurement of byte streams
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libsmithwaterman0
    determine similar regions between two strings or genomic sequences (lib)
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3

smithwaterman downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 8,6 kB33 kB [overzicht]
i386 8,9 kB28 kB [overzicht]