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Pakket: proteinortho (5.16+dfsg-1)

Verwijzigingen voor proteinortho

proteinortho

Trisquel bronnen:

Het bronpakket proteinortho downloaden:

Beheerder:

Original Maintainers:

  • Debian Med Packaging Team (Mailarchief)
  • Andreas Tille

Externe bronnen:

Vergelijkbare pakketten:

Detection of (Co-)orthologs in large-scale protein analysis

Proteinortho is a stand-alone tool that is geared towards large datasets and makes use of distributed computing techniques when run on multi-core hardware. It implements an extended version of the reciprocal best alignment heuristic. Proteinortho was applied to compute orthologous proteins in the complete set of all 717 eubacterial genomes available at NCBI at the beginning of 2009. Authors succeeded identifying thirty proteins present in 99% of all bacterial proteomes.

Andere aan proteinortho gerelateerde pakketten

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    Ook een virtueel pakket geboden door: libc6-udeb
    dep: libc6 (>= 2.4) [i386]
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: ncbi-blast+
    next generation suite of BLAST sequence search tools
  • dep: python
    interactive high-level object-oriented language (default version)

proteinortho downloaden

Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 139,8 kB280 kB [overzicht]
i386 141,8 kB279 kB [overzicht]