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[ Bron: predictprotein ]
Pakket: predictprotein (1.1.07-3)
Verwijzigingen voor predictprotein
Trisquel bronnen:
Het bronpakket predictprotein downloaden:
- [predictprotein_1.1.07-3.dsc]
- [predictprotein_1.1.07.orig.tar.gz]
- [predictprotein_1.1.07-3.debian.tar.xz]
Beheerder:
Original Maintainers:
- Debian Med Packaging Team (Mailarchief)
- Guy Yachdav
- Laszlo Kajan
- Andreas Tille
Externe bronnen:
- Homepage [www.predictprotein.org]
Vergelijkbare pakketten:
suite of protein sequence analysis tools
PredictProtein is a sequence analysis suite providing prediction of protein structure and function.
PredictProtein takes a protein sequence as input and provides the following per-residue, or whole protein annotations:
* secondary structure * solvent accessibility * multiple sequence alignments * PROSITE sequence motifs * low-complexity regions * nuclear localisation signals * regions lacking regular structure (NORS) * unstructured loops * transmembrane helices * transmembrane beta barrels * coiled-coil regions * disulfide-bonds * disordered regions * B-value flexibility * protein-protein interaction sites * Gene Ontology terms
Andere aan predictprotein gerelateerde pakketten
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- dep: bioperl
- Perl tools for computational molecular biology
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- dep: blast2
- transitional dummy package to ncbi-blast+-legacy
-
- dep: disulfinder
- cysteines disulfide bonding state and connectivity predictor
-
- dep: hmmer
- profile hidden Markov models for protein sequence analysis
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- dep: hmmer2
- profile hidden Markov models for protein sequence analysis
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- dep: librg-exception-perl
- RG::Exception Perl module
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- dep: librg-utils-perl
- parsers and format conversion utilities used by (e.g.) profphd
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- dep: make
- utility for directing compilation
Ook een virtueel pakket geboden door: make-guile
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- dep: metastudent
- predictor of Gene Ontology terms from protein sequence
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- dep: ncbi-seg
- tool to mask segments of low compositional complexity in amino acid sequences
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- dep: ncoils
- coiled coil secondary structure prediction
-
- dep: norsnet
- tool to identify unstructured loops in proteins
-
- dep: norsp
- predictor of non-regular secondary structure
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: predictnls
- prediction and analysis of protein nuclear localization signals
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- dep: profbval
- predictor of flexible/rigid protein residues from sequence
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- dep: profisis
- prediction of protein-protein interaction sites from sequence
-
- dep: profphd
- secondary structure and solvent accessibility predictor
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- dep: proftmb
- per-residue prediction of bacterial transmembrane beta barrels
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- dep: reprof
- protein secondary structure and accessibility predictor
-
- rec: pp-popularity-contest
- PredictProtein popularity contest
-
- sug: pp-cache-mgr (>= 1.0.3)
- Pakket niet beschikbaar
-
- sug: predictprotein-nonfree
- Pakket niet beschikbaar