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Pakket: pbbamtools (0.7.4+ds-1build2)

processing Pacific Biosciences binary alignment/map files

The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.

PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.

This package provides command-line utilities for working with PacBio BAM files.

Andere aan pbbamtools gerelateerde pakketten

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    Ook een virtueel pakket geboden door: libc6-udeb
  • dep: libgcc1 (>= 1:3.0)
    GCC support library
  • dep: libpbbam (= 0.7.4+ds-1build2)
    Pacific Biosciences binary alignment/map (BAM) library
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • rec: samtools
    processing sequence alignments in SAM and BAM formats

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Pakket downloaden voor alle beschikbare platforms
Platform Pakketgrootte Geïnstalleerde grootte Bestanden
amd64 106,3 kB485 kB [overzicht]