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[ Bron: macs ]
Pakket: macs (2.1.1.20160309-2)
Verwijzigingen voor macs
Trisquel bronnen:
Het bronpakket macs downloaden:
Beheerder:
Original Maintainers:
- Debian Med Packaging Team (Mailarchief)
- Michael R. Crusoe
- Andreas Tille
Externe bronnen:
- Homepage [github.com]
Vergelijkbare pakketten:
Model-based Analysis of ChIP-Seq on short reads sequencers
MACS empirically models the length of the sequenced ChIP fragments, which tends to be shorter than sonication or library construction size estimates, and uses it to improve the spatial resolution of predicted binding sites. MACS also uses a dynamic Poisson distribution to effectively capture local biases in the genome sequence, allowing for more sensitive and robust prediction. MACS compares favorably to existing ChIP-Seq peak-finding algorithms, is publicly available open source, and can be used for ChIP-Seq with or without control samples.
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