[ Bron: r-bioc-shortread ]
Pakket: r-bioc-shortread (1.36.0-1)
Verwijzigingen voor r-bioc-shortread
Trisquel bronnen:
Het bronpakket r-bioc-shortread downloaden:
- [r-bioc-shortread_1.36.0-1.dsc]
- [r-bioc-shortread_1.36.0.orig.tar.gz]
- [r-bioc-shortread_1.36.0-1.debian.tar.xz]
Beheerder:
Original Maintainers:
- Debian Med Packaging Team (Mailarchief)
- Andreas Tille
Externe bronnen:
- Homepage [bioconductor.org]
Vergelijkbare pakketten:
GNU R classes and methods for high-throughput short-read sequencing data
This BioConductor module is a package for input, quality assessment, manipulation and output of high-throughput sequencing data. ShortRead is provided in the R and Bioconductor environments, allowing ready access to additional facilities for advanced statistical analysis, data transformation, visualization and integration with diverse genomic resources.
Andere aan r-bioc-shortread gerelateerde pakketten
|
|
|
-
- dep: libc6 (>= 2.7)
- GNU C Library: Shared libraries
Ook een virtueel pakket geboden door: libc6-udeb
-
- dep: libgcc1 (>= 1:3.0)
- GCC support library
-
- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
-
- dep: r-api-3.4
- virtueel pakket geboden door r-base-core
-
- dep: r-base-core (>= 3.4.2-1ubuntu4)
- GNU R core of statistical computation and graphics system
-
- dep: r-bioc-biobase
- base functions for Bioconductor
-
- dep: r-bioc-biocgenerics (>= 0.23.3)
- generic functions for Bioconductor
-
- dep: r-bioc-biocparallel
- BioConductor facilities for parallel evaluation
-
- dep: r-bioc-biostrings (>= 2.37.1)
- GNU R string objects representing biological sequences
-
- dep: r-bioc-genomeinfodb (>= 1.1.19)
- BioConductor utilities for manipulating chromosome identifiers
-
- dep: r-bioc-genomicalignments (>= 1.5.4)
- BioConductor representation and manipulation of short genomic alignments
-
- dep: r-bioc-genomicranges (>= 1.21.6)
- BioConductor representation and manipulation of genomic intervals
-
- dep: r-bioc-iranges (>= 2.3.7)
- GNU R low-level containers for storing sets of integer ranges
-
- dep: r-bioc-rsamtools (>= 1.21.4)
- GNU R binary alignment (BAM), variant call (BCF), or tabix file import
-
- dep: r-bioc-s4vectors (>= 0.13.8)
- BioConductor S4 implementation of vectors and lists
-
- dep: r-cran-hwriter
- HTML Writer - Outputs R objects in HTML format
-
- dep: r-cran-lattice
- GNU R package for 'Trellis' graphics
-
- dep: r-cran-latticeextra
- GNU R package of additional graphical displays based on lattice
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
-
- sug: r-bioc-biomart
- GNU R Interface to BioMart databases (Ensembl, COSMIC, Wormbase and Gramene)
-
- sug: r-bioc-genomicfeatures
- GNU R tools for making and manipulating transcript centric annotations
-
- sug: r-cran-runit
- GNU R package providing unit testing framework