[ Source: rdp-classifier ]
Package: rdp-classifier (2.10.2-4)
Links for rdp-classifier
Trisquel Resources:
Download Source Package rdp-classifier:
- [rdp-classifier_2.10.2-4.dsc]
- [rdp-classifier_2.10.2.orig.tar.gz]
- [rdp-classifier_2.10.2-4.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Steffen Moeller
- Tim Booth
- Andreas Tille
External Resources:
- Homepage [github.com]
Similar packages:
extensible sequence classifier for fungal lsu, bacterial and archaeal 16s
The RDP Classifier is a naive Bayesian classifier which was developed to provide rapid taxonomic placement based on rRNA sequence data. The RDP Classifier can rapidly and accurately classify bacterial and archaeal 16s rRNA sequences, and Fungal LSU sequences. It provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. The RDP Classifier likely can be adapted to additional phylogenetically coherent bacterial taxonomies.
Other Packages Related to rdp-classifier
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- dep: default-jre
- Standard Java or Java compatible Runtime
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- dep: libcommons-cli-java
- Command line arguments and options parsing library
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- dep: librdp-taxonomy-tree-java
- taxonomy tree library from Ribosomal Database Project (RDP)
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- dep: rdp-readseq
- Ribosomal Database Project (RDP) sequence reading and writing
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- rec: rdp-classifier-doc
- documentation and examples for rdp-classifier
Download rdp-classifier
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 222.3 kB | 262 kB | [list of files] |