[ Source: probalign ]
Package: probalign (1.4-8build1)
Links for probalign
Trisquel Resources:
Download Source Package probalign:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
External Resources:
- Homepage [probalign.njit.edu]
Similar packages:
multiple sequence alignment using partition function posterior probabilities
Probalign uses partition function posterior probability estimates to compute maximum expected accuracy multiple sequence alignments. It performs statistically significantly better than the leading alignment programs Probcons v1.1, MAFFT v5.851, and MUSCLE v3.6 on BAliBASE 3.0, HOMSTRAD, and OXBENCH benchmarks. Probalign improvements are largest on datasets containing N/C terminal extensions and on datasets with long and heterogeneous length sequences. On heteregeneous length datasets containing repeats Probalign alignment accuracy is 10% and 15% higher than the other three methods when standard deviation of length is at least 300 and 400.
Other Packages Related to probalign
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- dep: libc6 (>= 2.27)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0) [amd64]
- GCC support library
- dep: libgcc-s1 (>= 3.5) [armhf]
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
Download probalign
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| amd64 | 65.4 kB | 171 kB | [list of files] |
| armhf | 55.0 kB | 114 kB | [list of files] |