Package: pbbamtools (1.0.6+dfsg-2build1)
Links for pbbamtools
Trisquel Resources:
Download Source Package pbbam:
- [pbbam_1.0.6+dfsg-2build1.dsc]
- [pbbam_1.0.6+dfsg.orig.tar.xz]
- [pbbam_1.0.6+dfsg-2build1.debian.tar.xz]
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Andreas Tille
External Resources:
- Homepage [pbbam.readthedocs.org]
Similar packages:
processing Pacific Biosciences binary alignment/map files
The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group.
PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information.
This package provides command-line utilities for working with PacBio BAM files.
Other Packages Related to pbbamtools
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- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb
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- dep: libgcc-s1 (>= 3.0)
- GCC support library
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- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
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- dep: libpbbam1.0.6 (= 1.0.6+dfsg-2build1)
- Pacific Biosciences binary alignment/map (BAM) library
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- dep: libpbcopper1.3.0 (>= 1.3.0+dfsg)
- data structures, algorithms, and utilities for C++ applications
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- dep: libstdc++6 (>= 5.2)
- GNU Standard C++ Library v3
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- rec: samtools
- processing sequence alignments in SAM, BAM and CRAM formats
Download pbbamtools
Architecture | Package Size | Installed Size | Files |
---|---|---|---|
amd64 | 75.1 kB | 319 kB | [list of files] |