[ Source: metastudent ]
Package: metastudent (2.0.1-8)
Links for metastudent
Trisquel Resources:
Download Source Package metastudent:
Maintainer:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Tobias Hamp
- Laszlo Kajan
External Resources:
- Homepage [rostlab.org]
Similar packages:
predictor of Gene Ontology terms from protein sequence
Often, only the sequence of a protein is known, but not its functions. Metastudent will try to predict missing functional annotations through homology searches (BLAST).
All predicted functions correspond to Gene Ontology (GO) terms from the Molecular Function (MFO), the Biological Process (BPO) and the Cellular Component Ontology (CCO) and are associated with a reliability score.
Other Packages Related to metastudent
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- dep: default-jre
- Standard Java or Java compatible Runtime
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- dep: libfile-chdir-perl
- more sensible way to change directories
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- dep: libgo-perl (>= 0.15-3)
- perl modules for GO and other OBO ontologies
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- dep: libgraphviz-perl
- Perl interface to the GraphViz graphing tool
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- dep: libipc-run-perl
- Perl module for running processes
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- dep: metastudent-data (>= 2.0.0)
- predictor of Gene Ontology terms from protein sequence - data files
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- dep: ncbi-blast+-legacy
- NCBI Blast legacy call script
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- dep: perl
- Larry Wall's Practical Extraction and Report Language
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
Download metastudent
| Architecture | Package Size | Installed Size | Files |
|---|---|---|---|
| all | 5,849.0 kB | 94968 kB | [list of files] |