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[ Source: fermi-lite  ]

Package: fml-asm (0.1-9ubuntu1)

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fml-asm

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tool for assembling Illumina short reads in small regions

Fml-asm is a command-line tool for assembling Illumina short reads in regions from 100bp to 10 million bp in size, based on the fermi-lite library. It is largely a light-weight in-memory version of fermikit without generating any intermediate files. It inherits the performance, the relatively small memory footprint and the features of fermikit. In particular, fermi-lite is able to retain heterozygous events and thus can be used to assemble diploid regions for the purpose of variant calling.

Other Packages Related to fml-asm

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.7) [armhf]
  • dep: zlib1g (>= 1:1.1.4)
    compression library - runtime

Download fml-asm

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 66.3 kB158 kB [list of files]
armhf 65.3 kB113 kB [list of files]