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Package: bcalm (2.2.1-2build1)

de Bruijn compaction in low memory

A bioinformatics tool for constructing the compacted de Bruijn graph from sequencing data.

This is the parallel version of the BCALM software using gatb-core library.

Other Packages Related to bcalm

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgatbcore3 (>= 1.4.1+git20190813.a73b6dd+dfsg)
    dynamic library of the Genome Analysis Toolbox
  • dep: libgcc-s1 (>= 3.0)
    GCC support library
  • dep: libhdf5-103
    Hierarchical Data Format 5 (HDF5) - runtime files - serial version
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3

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Architecture Package Size Installed Size Files
amd64 33.2 kB119 kB [list of files]