Skip to content
Sections
>> Trisquel >> Packages >> nabia >> gnu-r >> r-cran-tfmpvalue
nabia  ] [  aramo  ]
[ Source: r-cran-tfmpvalue  ]

Package: r-cran-tfmpvalue (0.0.8-1build1)

GNU R P-Value Computation for Position Weight Matrices

In putative Transcription Factor Binding Sites (TFBSs) identification from sequence/alignments, it is interesting to obtain the significance of certain match score. TFMPvalue provides the accurate calculation of P-value with score threshold for Position Weight Matrices, or the score with given P-value. This package is an interface to code originally made available by Helene Touzet and Jean-Stephane Varre, 2007, Algorithms Mol Biol:2, 15.

Other Packages Related to r-cran-tfmpvalue

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc-s1 (>= 3.0) [amd64]
    GCC support library
    dep: libgcc-s1 (>= 3.5) [armhf]
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: r-api-3.5
    virtual package provided by r-base-core
  • dep: r-base-core (>= 3.6.2.20200221-1build1)
    GNU R core of statistical computation and graphics system
  • dep: r-cran-rcpp (>= 0.11.1)
    GNU R package for Seamless R and C++ Integration

Download r-cran-tfmpvalue

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 53.3 kB162 kB [list of files]
armhf 50.4 kB125 kB [list of files]