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[ Source: htslib  ]

Package: htslib-test (1.10.2-3ubuntu0.1)

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htslib-test

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Download Source Package htslib:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Charles Plessy
  • Andreas Tille
  • Michael R. Crusoe

External Resources:

Similar packages:

Test data for HTSlib

HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.

HTSlib implements a generalized BAM (binary SAM) index, with file extension ‘csi’ (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.

This package contains test files and scripts for the HTSlib.

Other Packages Related to htslib-test

  • depends
  • recommends
  • suggests
  • dep: perl
    Larry Wall's Practical Extraction and Report Language

Download htslib-test

Download for all available architectures
Architecture Package Size Installed Size Files
all 970.5 kB7097 kB [list of files]