[ ソース: python-biopython ]
パッケージ: python3-biopython (1.70+dfsg-4)
python3-biopython に関するリンク
Trisquel の資源:
python-biopython ソースパッケージをダウンロード:
- [python-biopython_1.70+dfsg-4.dsc]
- [python-biopython_1.70+dfsg.orig.tar.xz]
- [python-biopython_1.70+dfsg-4.debian.tar.xz]
メンテナ:
Original Maintainers:
- Debian Med Packaging Team (メールアーカイブ)
- Charles Plessy
- Andreas Tille
外部の資源:
- ホームページ [biopython.org]
類似のパッケージ:
Python library for bioinformatics (implemented in Python 3)
The Biopython Project is an international association of developers of freely available Python tools for computational molecular biology.
It is a distributed collaborative effort to develop Python libraries and applications which address the needs of current and future work in bioinformatics. The source code is made available under the Biopython License, which is extremely liberal and compatible with almost every license in the world. The project works along with the Open Bioinformatics Foundation, who generously provide web and CVS space for the project.
This package is targeting Python version 3.
その他の python3-biopython 関連パッケージ
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- dep: libc6 (>= 2.14)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
- dep: python3 (<< 3.7)
- dep: python3 (>= 3.6~)
-
- dep: python3-numpy (>= 1:1.13.1)
- Fast array facility to the Python 3 language
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- dep: python3-numpy-abi9
- 以下のパッケージによって提供される仮想パッケージです: python3-numpy
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- dep: python3-reportlab
- ReportLab library to create PDF documents using Python3
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- rec: ncbi-blast+
- next generation suite of BLAST sequence search tools
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- rec: python-biopython-doc (= 1.70+dfsg-4)
- Documentation for the Biopython library
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- sug: bwa
- Burrows-Wheeler Aligner
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- sug: clustalo
- General purpose multiple sequence alignment program for proteins
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- sug: clustalw
- global multiple nucleotide or peptide sequence alignment
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- sug: dialign
- Segment-based multiple sequence alignment
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- sug: dssp
- protein secondary structure assignment based on 3D structure
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- sug: emboss
- European molecular biology open software suite
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- sug: fasttree
- phylogenetic trees from alignments of nucleotide or protein sequences
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- sug: mafft
- Multiple alignment program for amino acid or nucleotide sequences
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- sug: muscle
- Multiple alignment program of protein sequences
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- sug: phylip
- package of programs for inferring phylogenies
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- sug: phyml
- Phylogenetic estimation using Maximum Likelihood
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- sug: prank
- Probabilistic Alignment Kit for DNA, codon and amino-acid sequences
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- sug: probcons
- PROBabilistic CONSistency-based multiple sequence alignment
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- sug: python-mysqldb
- Python interface to MySQL
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- sug: python-reportlab
- ReportLab library to create PDF documents using Python
-
- sug: python3-matplotlib
- Python based plotting system in a style similar to Matlab (Python 3)
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- sug: python3-pil
- Python Imaging Library (Python3)
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- sug: python3-psycopg2
- Python 3 module for PostgreSQL
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- sug: python3-rdflib
- Python 3 library containing an RDF triple store and RDF parsers/serializers
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- sug: python3-renderpm
- python low level render interface
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- sug: python3-scipy
- scientific tools for Python 3
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- sug: python3-tk
- Tkinter - Writing Tk applications with Python 3.x
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- sug: raxml
- Randomized Axelerated Maximum Likelihood of phylogenetic trees
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- sug: samtools
- processing sequence alignments in SAM and BAM formats
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- sug: t-coffee
- Multiple Sequence Alignment
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- sug: w3-dtd-mathml
- Mathematical Markup Language V2.0 DTD
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- sug: wise (>= 2.4.1-16)
- comparison of biopolymers, like DNA and protein sequences