[ aramo ]
[ ソース: pyensembl ]
パッケージ: pyensembl (1.9.4+ds-1)
pyensembl に関するリンク
Trisquel の資源:
pyensembl ソースパッケージをダウンロード:
メンテナ:
Original Maintainers:
- Debian Med Packaging Team (メールアーカイブ)
- Steffen Moeller
外部の資源:
- ホームページ [github.com]
類似のパッケージ:
installs data from the Ensembl genome database
The Ensembl genome database is an established reference for genomic sequences and their automated annotation. To have this data local has advantages for bulk analyses, e.g. for the mapping of reads from RNA-seq against the latest golden path - or a previous one to compare analyses.
This package provides a reproducible way to insatll this data and thus simplify the automation of respective workflows.
その他の pyensembl 関連パッケージ
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- dep: python3
- interactive high-level object-oriented language (default python3 version)
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- dep: python3-datacache
- helpers for transparently downloading datasets
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- dep: python3-gtfparse
- parser for gene transfer format (aka GFF2)
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- dep: python3-memoized-property
- decorator to avoid redundant computation
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- dep: python3-pandas
- data structures for "relational" or "labeled" data
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- dep: python3-serializable
- base class with serialization methods
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- dep: python3-six (>= 1.9.0)
- Python 2 and 3 compatibility library (Python 3 interface)
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- dep: python3-typechecks
- express constraints on types