パッケージ: r-bioc-limma (3.50.0+dfsg-1)
r-bioc-limma に関するリンク
Trisquel の資源:
r-bioc-limma ソースパッケージをダウンロード:
- [r-bioc-limma_3.50.0+dfsg-1.dsc]
- [r-bioc-limma_3.50.0+dfsg.orig.tar.xz]
- [r-bioc-limma_3.50.0+dfsg-1.debian.tar.xz]
メンテナ:
Original Maintainers:
- Debian R Packages Maintainers
- Andreas Tille
- Kevin Murray
- Steffen Moeller
外部の資源:
- ホームページ [bioconductor.org]
類似のパッケージ:
linear models for microarray data
Microarrays are microscopic plates with carefully arranged short DNA strands and/or chemically prepared surfaces to which other DNA preferably binds. The amount of DNA binding at different locations of these chips, typically determined by a fluorescent dye, is to be interpreted. The technology is typically used with DNA that is derived from RNA, i.e to determine the activity of a gene and/or its splice variants. But the technology is also used to determine sequence variations in genomic DNA.
This Bioconductor package supports the analysis of gene expression microarray data, especially the use of linear models for analysing designed experiments and the assessment of differential expression. The package includes pre-processing capabilities for two-colour spotted arrays. The differential expression methods apply to all array platforms and treat Affymetrix, single channel and two channel experiments in a unified way.
その他の r-bioc-limma 関連パッケージ
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- dep: libc6 (>= 2.17)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
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- dep: r-api-4.0
- 以下のパッケージによって提供される仮想パッケージです: r-base-core
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- dep: r-api-bioc-3.14
- 以下のパッケージによって提供される仮想パッケージです: r-bioc-biocgenerics
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- dep: r-base-core (>= 4.1.2-1ubuntu1)
- GNU R core of statistical computation and graphics system
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- rec: r-bioc-go.db
- annotation maps describing the entire Gene Ontology
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- rec: r-bioc-org.hs.eg.db
- genome-wide annotation for Human
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- rec: r-cran-locfit
- GNU R local regression, likelihood and density estimation
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- rec: r-cran-mass
- GNU R package of Venables and Ripley's MASS
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- rec: r-cran-statmod (>= 1.2.2)
- GNU R package providing algorithms and functions for statistical modeling
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- sug: r-bioc-affy
- BioConductor methods for Affymetrix Oligonucleotide Arrays
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- sug: r-bioc-annotationdbi
- GNU R Annotation Database Interface for BioConductor
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- sug: r-bioc-biobase
- base functions for Bioconductor
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- sug: r-cran-biasedurn
- GNU R Biased Urn model distributions
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- sug: r-cran-ellipse
- GNU R functions for drawing ellipses and ellipse-like confidence regions
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- sug: r-cran-gplots
- GNU R package with tools for plotting data by Greg Warnes et al