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[ aramo ]
[ ソース: libbio-db-hts-perl ]
パッケージ: libbio-db-hts-perl (3.01-3build2)
libbio-db-hts-perl に関するリンク
Trisquel の資源:
libbio-db-hts-perl ソースパッケージをダウンロード:
- [libbio-db-hts-perl_3.01-3build2.dsc]
- [libbio-db-hts-perl_3.01.orig.tar.gz]
- [libbio-db-hts-perl_3.01-3build2.debian.tar.xz]
メンテナ:
Original Maintainers:
- Debian Med Packaging Team (メールアーカイブ)
- Andreas Tille
外部の資源:
- ホームページ [metacpan.org]
類似のパッケージ:
Perl interface to the HTS library
HTSlib is an implementation of a unified C library for accessing common file formats, such as SAM (Sequence Alignment/Map), CRAM and VCF (Variant Call Format), used for high-throughput sequencing data, and is the core library used by samtools and bcftools. HTSlib only depends on zlib. It is known to be compatible with gcc, g++ and clang.
HTSlib implements a generalized BAM (binary SAM) index, with file extension 'csi' (coordinate-sorted index). The HTSlib file reader first looks for the new index and then for the old if the new index is absent.
This package provides a Perl interface to the HTS library.
その他の libbio-db-hts-perl 関連パッケージ
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- dep: libbio-perl-perl
- BioPerl core perl modules
-
- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
以下のパッケージによって提供される仮想パッケージでもあります: libc6-udeb
-
- dep: libhts3 (>= 1.10)
- C library for high-throughput sequencing data formats
-
- dep: perl
- Larry Wall's Practical Extraction and Report Language
-
- dep: perlapi-5.34.0
- 以下のパッケージによって提供される仮想パッケージです: perl-base
-
- dep: zlib1g (>= 1:1.2.3.3)
- compression library - runtime