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Source Package: circlator (1.5.6-6)

Links for circlator

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The following binary packages are built from this source package:
circlator
circularize genome assemblies

Other Packages Related to circlator

  • build-depends
  • build-depends-indep
  • adep: debhelper-compat (= 13)
    Package not available
  • adep: dh-python
    Debian helper tools for packaging Python libraries and applications
  • adep: python3-all
    package depending on all supported Python 3 runtime versions
  • adep: python3-setuptools
    Python3 Distutils Enhancements
  • adep: python3-openpyxl
    Python 3 module to read/write OpenXML xlsx/xlsm files
  • adep: python3-jdcal
    Julian dates from proleptic Gregorian and Julian calendars
  • adep: fastaq (>= 3.12.1)
    FASTA and FASTQ file manipulation tools
  • adep: python3-pysam
    interface for the SAM/BAM sequence alignment and mapping format (Python 3)
  • adep: python3-pymummer
    Python 3 interface to MUMmer
  • adep: python3-pytest
    Simple, powerful testing in Python3
  • adep: spades
    genome assembler for single-cell and isolates data sets
  • adep: bwa (>= 0.7.12)
    Burrows-Wheeler Aligner
  • adep: prodigal
    Microbial (bacterial and archaeal) gene finding program
  • adep: canu (<< 1.8+dfsg-1)
    single molecule sequence assembler for genomes
    or canu (>= 1.8+dfsg-2)
    single molecule sequence assembler for genomes

Download circlator

FileSize (in kB)MD5 checksum
circlator_1.5.6-6.dsc 2.2 kB 1e31202ebc04313a411d4c74c9c78592
circlator_1.5.6.orig.tar.gz 5,590.2 kB dbb1ab9bf8d9834fa9106dc99e85d76e
circlator_1.5.6-6.debian.tar.xz 4.5 kB 191e3b8e3f77eec47ce15c5bb1cc4786
Debian Package Source Repository (VCS: Git)
https://salsa.debian.org/med-team/circlator.git
Debian Package Source Repository (Browsable)
https://salsa.debian.org/med-team/circlator