Package: murasaki-common (1.68.6-13build1)

Links for murasaki-common

Trisquel Resources:

Download Source Package murasaki:

Maintainer:

Debian Med Packaging Team (Mail Archive)

Original Maintainers:

Debian Med Packaging Team (Mail Archive)
Andreas Tille
Nilesh Patra

External Resources:

Homepage [murasaki.dna.bio.keio.ac.jp]

Similar packages:

homology detection tool across multiple large genomes (common files)

Murasaki is a scalable and fast, language theory-based homology detection tool across multiple large genomes. It enable whole-genome scale multiple genome global alignments. Supports unlimited length gapped-seed patterns and unique TF-IDF based filtering.

Murasaki is an anchor alignment software, which is

 * exteremely fast (17 CPU hours for whole Human x Mouse genome (with
   40 nodes: 52 wall minutes))
 * scalable (Arbitrarily parallelizable across multiple nodes using MPI.
   Even a single node with 16GB of ram can handle over 1Gbp of sequence.)
 * unlimited pattern length
 * repeat tolerant
 * intelligent noise reduction

This package contains all files that are common to the single core murasaki package and the multi core murasaki-mpi package.

Other Packages Related to murasaki-common

depends

recommends

suggests

dep: gnuplot

Command-line driven interactive plotting program.
also a virtual package provided by gnuplot-nox, gnuplot-qt, gnuplot-x11

or gnuplot5

Package not available
dep: imagemagick

image manipulation programs -- binaries
also a virtual package provided by graphicsmagick-imagemagick-compat, imagemagick-6.q16
dep: libbio-perl-perl

BioPerl core perl modules
dep: r-cran-rocr

GNU R package to prepare and display ROC curves

rec: libterm-readkey-perl

perl module for simple terminal control
rec: libtext-wrapi18n-perl

internationalized substitute of Text::Wrap

or libtext-wrapper-perl

simple word wrapping routine

Download murasaki-common

Download for all available architectures
Architecture	Package Size	Installed Size	Files
all	144.3 kB	433 kB	[list of files]

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