Paquet : pilon (1.23+dfsg-1)
Liens pour pilon
Ressources Trisquel :
Télécharger le paquet source pilon :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Andreas Tille
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
automated genome assembly improvement and variant detection tool
Pilon is a software tool which can be used to:
* Automatically improve draft assemblies * Find variation among strains, including large event detectionPilon requires as input a FASTA file of the genome along with one or more BAM files of reads aligned to the input FASTA file. Pilon uses read alignment analysis to identify inconsistencies between the input genome and the evidence in the reads. It then attempts to make improvements to the input genome, including:
* Single base differences * Small indels * Larger indel or block substitution events * Gap filling * Identification of local misassemblies, including optional opening of new gaps
Autres paquets associés à pilon
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- dep: default-jre
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- ou java-runtime
- paquet virtuel fourni par default-jre, openjdk-11-jre
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- dep: scala-library
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Télécharger pilon
Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
---|---|---|---|
all | 411,3 ko | 480 ko | [liste des fichiers] |