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[ Paquet source : skesa ]
Paquet : skesa (2.4.0-3)
Liens pour skesa
Ressources Trisquel :
Télécharger le paquet source skesa :
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Andreas Tille
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
strategic Kmer extension for scrupulous assemblies
SKESA is a DeBruijn graph-based de-novo assembler designed for assembling reads of microbial genomes sequenced using Illumina. Comparison with SPAdes and MegaHit shows that SKESA produces assemblies that have high sequence quality and contiguity, handles low-level contamination in reads, is fast, and produces an identical assembly for the same input when assembled multiple times with the same or different compute resources. SKESA has been used for assembling over 272,000 read sets in the Sequence Read Archive at NCBI and for real-time pathogen detection.
Autres paquets associés à skesa
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- dep: libc6 (>= 2.34)
- GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
-
- dep: libgcc-s1 (>= 3.3.1)
- GCC support library
-
- dep: libncbi-vdb2 (>= 2.11.2+dfsg)
- libraries for using data in the INSDC Sequence Read Archives
-
- dep: libstdc++6 (>= 11)
- GNU Standard C++ Library v3
-
- dep: libzstd1 (>= 1.4.0)
- fast lossless compression algorithm
-
- dep: zlib1g (>= 1:1.1.4)
- compression library - runtime
Télécharger skesa
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 707,0 ko | 2479 ko | [liste des fichiers] |