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[ Paquet source : r-bioc-grohmm ]
Paquet : r-bioc-grohmm (1.28.0-1)
Liens pour r-bioc-grohmm
Ressources Trisquel :
Télécharger le paquet source r-bioc-grohmm :
- [r-bioc-grohmm_1.28.0-1.dsc]
- [r-bioc-grohmm_1.28.0.orig.tar.gz]
- [r-bioc-grohmm_1.28.0-1.debian.tar.xz]
Responsable :
Original Maintainers:
- Debian R Packages Maintainers
- Steffen Moeller
Ressources externes :
- Page d'accueil [bioconductor.org]
Paquets similaires :
GRO-seq Analysis Pipeline
This BioConductor package provides a pipeline for the analysis of GRO- seq data. Among the more advanced features, r-bioc-grohmm predicts the boundaries of transcriptional activity across the genome de novo using a two-state hidden Markov model (HMM).
The used model essentially divides the genome into transcribed and non- transcribed regions in a strand specific manner. HMMs are used to identify the leading edge of Pol II at genes activated by a stimulus in GRO-seq time course data. This approach allows the genome-wide interrogation of transcription rates in cells.
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Télécharger r-bioc-grohmm
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| amd64 | 4 333,5 ko | 4500 ko | [liste des fichiers] |
| arm64 | 4 331,9 ko | 4492 ko | [liste des fichiers] |
| armhf | 4 329,3 ko | 4479 ko | [liste des fichiers] |
| ppc64el | 4 340,0 ko | 4576 ko | [liste des fichiers] |