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Paquet : maq (0.7.1-9)

maps short fixed-length polymorphic DNA sequence reads to reference sequences

Maq (short for Mapping and Assembly with Quality) builds mapping assemblies from short reads generated by the next-generation sequencing machines. It was particularly designed for Illumina-Solexa 1G Genetic Analyzer, and has a preliminary functionality to handle ABI SOLiD data. Maq is previously known as mapass2.

Developmemt of Maq stopped in 2008. Its successors are BWA and SAMtools.

Autres paquets associés à maq

  • dépendances
  • recommandations
  • suggestions
  • dep: libc6 (>= 2.29)
    GNU C Library: Shared libraries
    un paquet virtuel est également fourni par libc6-udeb
  • dep: libgcc-s1 (>= 3.5) [armhf]
    GCC support library
    dep: libgcc-s1 (>= 4.2) [arm64, ppc64el]
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3
  • dep: zlib1g (>= 1:1.2.3.3)
    compression library - runtime
  • sug: bwa
    Burrows-Wheeler Aligner
  • sug: samtools
    processing sequence alignments in SAM, BAM and CRAM formats

Télécharger maq

Télécharger pour toutes les architectures proposées
Architecture Taille du paquet Espace occupé une fois installé Fichiers
amd64 273,4 ko520 ko [liste des fichiers]
arm64 264,2 ko496 ko [liste des fichiers]
armhf 264,4 ko451 ko [liste des fichiers]
ppc64el 298,3 ko624 ko [liste des fichiers]