Paquet : blixem (4.44.1+dfsg-7build1)

Liens pour blixem

Ressources Trisquel :

Télécharger le paquet source seqtools :

Responsable :

Ubuntu Developers (Archive du courrier électronique)

Original Maintainers:

Debian Med Packaging Team (Archive du courrier électronique)
Andreas Tille

Ressources externes :

Page d'accueil [www.sanger.ac.uk]

Paquets similaires :

interactive browser of sequence alignments

Blixem is an interactive browser of sequence alignments that have been stacked up in a "master-slave" multiple alignment; it is not a 'true' multiple alignment but a 'one-to-many' alignment.

 * Overview section showing the positions of genes and alignments around
   the alignment window
 * Detail section showing the actual alignment of protein or nucleotide
   sequences to the genomic DNA sequence.
 * View alignments against both strands of the reference sequence.
 * View sequences in nucleotide or protein mode; in protein mode, Blixem
   will display the three-frame translation of the reference sequence.
 * Residues are highlighted in different colours depending on whether
   they are an exact match, conserved substitution or mismatch.
 * Gapped alignments are supported, with insertions and deletions being
   highlighted in the match sequence.
 * Matches can be sorted and filtered.
 * SNPs and other variations can be highlighted in the reference
   sequence.
 * Poly(A) tails can be displayed and poly(A) signals highlighted in the
   reference sequence.

Autres paquets associés à blixem

dépendances

recommandations

suggestions

dep: libc6 (>= 2.34)

GNU C Library: Shared libraries
un paquet virtuel est également fourni par libc6-udeb
dep: libcairo2 (>= 1.2.4)

Cairo 2D vector graphics library
dep: libcurl4 (>= 7.16.2)

easy-to-use client-side URL transfer library (OpenSSL flavour)
dep: libgbtools0 (>= 4.44.1+dfsg)

library for visualising sequence alignments
dep: libgcc-s1 (>= 3.3.1) [non armhf]

GCC support library

dep: libgcc-s1 (>= 3.5) [armhf]
dep: libglib2.0-0 (>= 2.35.9)

GLib library of C routines
dep: libgtk2.0-0 (>= 2.14.0)

GTK graphical user interface library - old version
dep: libpango-1.0-0 (>= 1.14.0)

Layout and rendering of internationalized text
dep: libsqlite3-0 (>= 3.5.9)

SQLite 3 shared library
dep: libstdc++6 (>= 5.2) [non ppc64el]

GNU Standard C++ Library v3

dep: libstdc++6 (>= 9) [ppc64el]

Télécharger blixem

Télécharger pour toutes les architectures proposées
Architecture	Taille du paquet	Espace occupé une fois installé	Fichiers
amd64	1 299,3 ko	2182 ko	[liste des fichiers]
arm64	1 273,5 ko	2074 ko	[liste des fichiers]
armhf	1 243,5 ko	1722 ko	[liste des fichiers]
ppc64el	1 343,5 ko	2570 ko	[liste des fichiers]

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