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[ Paquet source : plasmidseeker ]
Paquet : plasmidseeker (1.3+dfsg-2)
Liens pour plasmidseeker
Ressources Trisquel :
Télécharger le paquet source plasmidseeker :
- [plasmidseeker_1.3+dfsg-2.dsc]
- [plasmidseeker_1.3+dfsg.orig.tar.xz]
- [plasmidseeker_1.3+dfsg-2.debian.tar.xz]
Responsable :
Original Maintainers:
- Debian Med Packaging Team (Archive du courrier électronique)
- Andreas Tille
Ressources externes :
- Page d'accueil [github.com]
Paquets similaires :
identification of known plasmids from whole-genome sequencing reads
PlasmidSeeker is a k-mer based program for the identification of known plasmids from bacterial whole genome sequencing reads.
PlasmidSeeker that enables the detection of plasmids from bacterial WGS data without read assembly. The PlasmidSeeker algorithm is based on k-mers and uses k-mer abundance to distinguish between plasmid and bacterial sequences. The performance of PlasmidSeeker was tested on a set of simulated and real bacterial WGS samples, resulting in 100% sensitivity and 99.98% specificity.
Autres paquets associés à plasmidseeker
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- dep: genometester
- toolkit for performing set operations on k-mer lists
Télécharger plasmidseeker
| Architecture | Taille du paquet | Espace occupé une fois installé | Fichiers |
|---|---|---|---|
| arm64 | 29,3 ko | 94 ko | [liste des fichiers] |