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Paquet : meryl (0~20150903+r2013-8build2)

in- and out-of-core kmer counting and utilities

meryl computes the kmer content of genomic sequences. Kmer content is represented as a list of kmers and the number of times each occurs in the input sequences. The kmer can be restricted to only the forward kmer, only the reverse kmer, or the canonical kmer (lexicographically smaller of the forward and reverse kmer at each location). Meryl can report the histogram of counts, the list of kmers and their counts, or can perform mathematical and set operations on the processed data files.

This package is part of the Kmer suite.

Autres paquets associés à meryl

  • dépendances
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  • dep: libc6 (>= 2.34)
    GNU C Library: Shared libraries
    un paquet virtuel est également fourni par libc6-udeb
  • dep: libgcc-s1 (>= 3.3.1)
    GCC support library
  • dep: libstdc++6 (>= 5)
    GNU Standard C++ Library v3

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Architecture Taille du paquet Espace occupé une fois installé Fichiers
amd64 195,5 ko809 ko [liste des fichiers]