Source Package: salmon (0.7.2+ds1-3)
Links for salmon
Trisquel-palvelut:
Ylläpitäjä:
Original Maintainers:
- Debian Med Packaging Team (Mail Archive)
- Michael R. Crusoe
- Kevin Murray
External Resources:
- Kotisivu [github.com]
Seuraavat binääripaketit on käännetty tästä lähdepaketista:
- salmon
- wicked-fast transcript quantification from RNA-seq data
Muut pakettiin salmon liittyvät paketit
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- adep: debhelper (>= 9)
- helper programs for debian/rules
-
- adep: cmake
- cross-platform, open-source make system
-
- adep: libboost-filesystem-dev
- filesystem operations (portable paths, iteration over directories, etc) in C++ (default version)
-
- adep: libboost-system-dev
- Operating system (e.g. diagnostics support) library (default version)
-
- adep: libboost-iostreams-dev
- Boost.Iostreams Library development files (default version)
-
- adep: libboost-thread-dev
- portable C++ multi-threading (default version)
-
- adep: libboost-program-options-dev
- program options library for C++ (default version)
-
- adep: libboost-timer-dev
- C++ wall clock and CPU process timers (default version)
-
- adep: libjellyfish-2.0-dev (>> 2.2.3-2)
- count k-mers in DNA sequences (development files of jellyfish)
-
- adep: libsparsehash-dev
- Google's extremely memory-efficient C++ hash_map implementation
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- adep: libdivsufsort-dev
- libdivsufsort header files
-
- adep: libbwa-dev
- Burrows-Wheeler Aligner source files
-
- adep: pkg-config
- manage compile and link flags for libraries
-
- adep: libjemalloc-dev
- development files and documentation for jemalloc
-
- adep: libcereal-dev
- C++11 library for serialization
-
- adep: libtbb-dev
- parallelism library for C++ - development files
-
- adep: libgff-dev
- GFF/GTF parsing from cufflinks as a library
-
- adep: libstaden-read-dev
- development files for libstaden-read
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- adep: libspdlog-dev
- Very fast, header only, C++ logging library
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- adep: libtclap-dev
- Templatized command-line argument parser for C++
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- adep: help2man
- Automatic manpage generator
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- adep: sphinx-doc
- documentation generator for Python projects - documentation
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- adep: python-sphinx
- documentation generator for Python projects (implemented in Python 2)
- tai python3-sphinx
- documentation generator for Python projects (implemented in Python 3)
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- adep: python-sphinx-rtd-theme
- sphinx theme from readthedocs.org (Python 2)
- tai python3-sphinx-rtd-theme
- sphinx theme from readthedocs.org (Python 3)
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- adep: zlib1g-dev
- compression library - development
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- adep: libeigen3-dev
- lightweight C++ template library for linear algebra
Download salmon
| Tiedosto | Koko (kt) | MD5-tarkiste |
|---|---|---|
| salmon_0.7.2+ds1-3.dsc | 2.1 kt | 3d1e0d363a34f0177cc32963553f2bbc |
| salmon_0.7.2+ds1.orig.tar.xz | 924.5 kt | 8ccc2502c9209e6e1f06314369f4c68e |
| salmon_0.7.2+ds1-3.debian.tar.xz | 74.4 kt | f6f8efc3904f8f57b7cabc0c16d2748a |
- Debian Package Source Repository (VCS: Git)
- https://anonscm.debian.org/git/debian-med/salmon.git
- Debian Package Source Repository (Browsable)
- https://anonscm.debian.org/cgit/debian-med/salmon.git