Paketti: r-cran-seurat (4.1.0-1)

Links for r-cran-seurat

Trisquel-palvelut:

• Install using apturl
• Entry at directory.fsf.org
• Vikailmoitukset
• Changelog
• Tekijänoikeustiedosto

Imuroi lähdekoodipaketti r-cran-seurat:

• [r-cran-seurat_4.1.0-1.dsc]
• [r-cran-seurat_4.1.0.orig.tar.gz]
• [r-cran-seurat_4.1.0-1.debian.tar.xz]

Ylläpitäjä:

• Debian R Packages Maintainers

Original Maintainers:

• Debian R Packages Maintainers
• Steffen Moeller

External Resources:

• Kotisivu [cran.r-project.org]

Samankaltaisia paketteja:

• r-bioc-scater
• r-cran-sctransform
• r-bioc-singler
• r-cran-genie
• pizzly
• crac
• r-bioc-edaseq
• r-bioc-shortread
• r-cran-bios2cor
• r-bioc-edger
• r-cran-coarsedatatools

Muut pakettiin r-cran-seurat liittyvät paketit

• dep: libc6 (>= 2.32)

  GNU C Library: Shared libraries
  myös näennäispaketti, jonka toteuttaa libc6-udeb

• dep: libgcc-s1 (>= 3.0) [ei armhf]

  GCC support library

  dep: libgcc-s1 (>= 3.5) [armhf]

• dep: libstdc++6 (>= 11)

  GNU Standard C++ Library v3

• dep: r-api-4.0

  näennäispaketti, jonka toteuttaa r-base-core

• dep: r-base-core (>= 4.1.2-1ubuntu1)

  GNU R core of statistical computation and graphics system

• dep: r-cran-cluster

  GNU R package for cluster analysis by Rousseeuw et al

• dep: r-cran-cowplot

  GNU R streamlined plot theme and plot annotations for 'ggplot2'

• dep: r-cran-fitdistrplus

  support fit of parametric distribution

• dep: r-cran-future

  R package: A Future API for R

• dep: r-cran-future.apply

  apply function to elements in parallel using futures

• dep: r-cran-ggplot2 (>= 3.3.0)

  implementation of the Grammar of Graphics

• dep: r-cran-ggrepel

  auto-position non-overlapping text labels in plots

• dep: r-cran-ggridges

  Ridgeline Plots in 'ggplot2'

• dep: r-cran-httr

  GNU R tools for working with URLs and HTTP

• dep: r-cran-ica

  Independent Component Analysis

• dep: r-cran-igraph

  GNU R network analysis and visualization

• dep: r-cran-irlba

  GNU R fast truncated SVD, PCA and symmetric eigendecomposition

• dep: r-cran-jsonlite

  Robust, High Performance JSON Parser and Generator for R

• dep: r-cran-kernsmooth

  GNU R package for kernel smoothing and density estimation

• dep: r-cran-leiden (>= 0.3.1)

  GNU R implementation of Leiden clustering algorithm

• dep: r-cran-lmtest

  GNU R package for diagnostic checking in linear models

• dep: r-cran-mass

  GNU R package of Venables and Ripley's MASS

• dep: r-cran-matrixstats

  GNU R methods that apply to rows and columns of a matrix

• dep: r-cran-miniui

  Shiny UI Widgets for Small Screens

• dep: r-cran-patchwork

  GNU R the composer of plots

• dep: r-cran-pbapply

  GNU R package providing progress bars for vectorized R functions

• dep: r-cran-plotly (>= 4.9.0)

  create interactive web graphics via 'plotly.js' in GNU R

• dep: r-cran-png

  GNU R package to read and write PNG images

• dep: r-cran-rann

  Fast Nearest Neighbour Search Using L2 Metric

• dep: r-cran-rcolorbrewer

  GNU R package providing suitable color palettes

• dep: r-cran-rcpp (>= 1.0.7)

  GNU R package for Seamless R and C++ Integration

• dep: r-cran-rcppannoy (>= 0.0.18)

  Rcpp bindings for Annoy (approximate nearest neighbors)

• dep: r-cran-rcppeigen

  GNU R package for Eigen templated linear algebra

• dep: r-cran-rcppprogress

  interruptible progress bar for C++ in GNU R packages

• dep: r-cran-reticulate

  R interface to Python modules, classes, and functions

• dep: r-cran-rlang

  Functions for Base Types and Core R and 'Tidyverse' Features

• dep: r-cran-rocr

  GNU R package to prepare and display ROC curves

• dep: r-cran-rtsne

  GNU R T-Distributed Stochastic Neighbor Embedding using a Barnes-Hut

• dep: r-cran-scales

  Scale functions for visualization

• dep: r-cran-scattermore (>= 0.7)

  GNU R scatterplots with more points

• dep: r-cran-sctransform (>= 0.3.3)

  Variance Stabilizing Transformations for Single Cell UMI Data

• dep: r-cran-seuratobject (>= 4.0.4)

  GNU R data structures for single cell data

• dep: r-cran-shiny

  GNU R web application framework

• dep: r-cran-spatstat.core

  core functionality of the 'spatstat' family of GNU R packages

• dep: r-cran-spatstat.geom

  GNU R geometrical functionality of the 'spatstat' package

• dep: r-cran-tibble

  GNU R Simple Data Frames

• dep: r-cran-uwot (>= 0.1.9)

  GNU R uniform manifold approximation and projection (UMAP)

• rec: r-cran-hdf5r

  GNU R interface to the 'HDF5' binary data format

• rec: r-cran-testthat

  GNU R testsuite

• sug: r-bioc-biobase

  base functions for Bioconductor

• sug: r-bioc-biocgenerics

  generic functions for Bioconductor

• sug: r-bioc-deseq2

  R package for RNA-Seq Differential Expression Analysis

• sug: r-bioc-genomeinfodb

  BioConductor utilities for manipulating chromosome identifiers

• sug: r-bioc-genomicranges

  BioConductor representation and manipulation of genomic intervals

• sug: r-bioc-iranges

  GNU R low-level containers for storing sets of integer ranges

• sug: r-bioc-limma

  linear models for microarray data

• sug: r-bioc-monocle

  clustering, differential expression, and trajectory analysis for RNA-Seq

• sug: r-bioc-rtracklayer

  GNU R interface to genome browsers and their annotation tracks

• sug: r-bioc-s4vectors

  BioConductor S4 implementation of vectors and lists

• sug: r-bioc-singlecellexperiment

  S4 Classes for Single Cell Data

• sug: r-bioc-summarizedexperiment

  BioConductor assay container

• sug: r-cran-ape

  GNU R package for Analyses of Phylogenetics and Evolution

• sug: r-cran-metap

  Meta-Analysis of Significance Values

• sug: r-cran-mixtools

  GNU R tools for analyzing finite mixture models

• sug: r-cran-rsvd

  Randomized Singular Value Decomposition

• sug: r-cran-vgam

  GNU R package for estimating vector generalized additive models

Imuroi r-cran-seurat