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Paketti: kmer (0~20150903+r2013-8build2)

suite of tools for DNA sequence analysis

The kmer package is a suite of tools for DNA sequence analysis. It provides tools for searching (ESTs, mRNAs, sequencing reads); aligning (ESTs, mRNAs, whole genomes); and a variety of analyses based on kmers.

This is a metapackage depending on the executable components of the kmer suite.

Muut pakettiin kmer liittyvät paketit

  • depends
  • recommends
  • suggests
  • dep: atac
    genome assembly-to-assembly comparison
  • dep: leaff
    biological sequence library utilities and applications
  • dep: meryl
    in- and out-of-core kmer counting and utilities
  • dep: sim4db
    batch spliced alignment of cDNA sequences to a target genome

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