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Package: ncbi-seg (0.0.20000620-4)

tool to mask segments of low compositional complexity in amino acid sequences

ncbi-seg (a.k.a. SEG) is a program for identifying and masking segments of low compositional complexity in amino acid sequences.

ncbi-seg divides sequences into contrasting segments of low-complexity and high-complexity. Low-complexity segments defined by the algorithm represent "simple sequences" or "compositionally-biased regions".

This program is inappropriate for masking nucleotide sequences and, in fact, may strip some nucleotide ambiguity codes from nt. sequences as they are being read.

Other Packages Related to ncbi-seg

  • depends
  • recommends
  • suggests
  • dep: libc6 (>= 2.14) [amd64]
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
    dep: libc6 (>= 2.4) [i386]

Download ncbi-seg

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 76.2 kB126 kB [list of files]
i386 76.9 kB129 kB [list of files]