Package: msxpertsuite (4.1.0-1)

Links for msxpertsuite

Trisquel Resources:

Download Source Package msxpertsuite:

Maintainer:

The Debichem Group (Mail Archive)

Original Maintainers:

The Debichem Group (Mail Archive)
Filippo Rusconi

External Resources:

Homepage [www.msxpertsuite.org]

Similar packages:

mass spectrometry software suite - executable files

msXpertSuite is a collection of programs to simulate and analyse mass spectrometric data obtained on linear (bio-)polymers. It is the successor of GNU polyXmass, first, and of massXpert, second.

Three programs, massXpert, mineXpert and convXpert allow the following:

massXpert:

 - making brand new polymer chemistry definitions;
 - using the definitions to perform easy calculations in a desktop
   calculator-like manner;
 - performing sophisticated polymer sequence editing and simulations;
 - perform m/z list comparisons;

Chemical simulations encompass cleavage (either chemical or enzymatic), gas-phase fragmentations, chemical modification of any monomer in the polymer sequence, cross-linking of monomers in the sequence, arbitrary mass searches, calculation of the isotopic pattern...

mineXpert:

 - Open mass spectrometry data files (mzML, mzXML, asc, xy, ...);
 - Calculate and display the TIC chromatogram;
 - For mobility data, calculate and display a mz=f(dt) color map;
 - Integrate the data from the TIC chromatogram or color map
   - to mass spectrum;
   - to drift spectrum;
   - back to TIC chromatogram (XIC chromatogram);
   - reverse operations;
 - Export the data to text files;
 - Slice a big initial file into smaller chunks for easier mining;
 - Define how mining activity is recorded on disk for later use;
 - Convert mzML files into a private (albeit open) mass spectrometry
   format that allows better performance (based on SQLite3).

This package contains the binary programs.

Other Packages Related to msxpertsuite

depends

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suggests

dep: libc6 (>= 2.14) [amd64]

GNU C Library: Shared libraries
also a virtual package provided by libc6-udeb

dep: libc6 (>= 2.4) [i386]
dep: libgcc1 (>= 1:3.0)

GCC support library
dep: libgomp1 (>= 4.9)

GCC OpenMP (GOMP) support library
dep: libpwiz3 (>= 3.0.0)

library to perform proteomics data analyses (runtime)
dep: libqcustomplot1.3

Qt C++ widget for plotting
dep: libqt5core5a (>= 5.9.0~beta)

Qt 5 core module
dep: libqt5gui5 (>= 5.8.0)

Qt 5 GUI module
dep: libqt5script5 (>= 5.6.0~beta)

Qt 5 script module
dep: libqt5sql5 (>= 5.7.0)

Qt 5 SQL module
dep: libqt5svg5 (>= 5.6.0~beta)

Qt 5 SVG module
dep: libqt5widgets5 (>= 5.7.0)

Qt 5 widgets module
dep: libqt5xml5 (>= 5.7.0)

Qt 5 XML module
dep: libstdc++6 (>= 5.2)

GNU Standard C++ Library v3
dep: msxpertsuite-data (<< 4.1.0A~)

mass spectrometry software suite - arch-indep data

dep: msxpertsuite-data (>= 4.1.0)

sug: msxpertsuite-doc

mass spectrometry software suite - manuals

Download msxpertsuite

Download for all available architectures
Architecture	Package Size	Installed Size	Files
amd64	1,758.3 kB	7815 kB	[list of files]
i386	1,825.0 kB	7741 kB	[list of files]

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