Skip to content
Sections
>> Trisquel >> Packages >> etiona >> science >> mothur-mpi
etiona  ]
[ Source: mothur  ]

Package: mothur-mpi (1.39.5-2build1)

Links for mothur-mpi

mothur-mpi

Trisquel Resources:

Download Source Package mothur:

Maintainer:

Original Maintainers:

  • Debian Med Packaging Team (Mail Archive)
  • Steffen Moeller
  • Andreas Tille
  • Tim Booth
  • Tomasz Buchert

External Resources:

Similar packages:

mpi-enabled binary for mothur

Mothur seeks to develop a single piece of open-source, expandable software to fill the bioinformatics needs of the microbial ecology community. It has incorporated the functionality of dotur, sons, treeclimber, s-libshuff, unifrac, and much more. In addition to improving the flexibility of these algorithms, a number of other features including calculators and visualization tools were added.

Provides the MPI-enabled binary for Mothur This is recommended for operations like shhh.flows which will be very slow on a single processor.

Other Packages Related to mothur-mpi

  • depends
  • recommends
  • suggests
  • dep: libboost-iostreams1.65.1
    Boost.Iostreams Library
  • dep: libc6 (>= 2.23)
    GNU C Library: Shared libraries
    also a virtual package provided by libc6-udeb
  • dep: libgcc1 (>= 1:3.0) [amd64]
    GCC support library
    dep: libgcc1 (>= 1:4.2) [i386]
  • dep: libreadline7 (>= 6.0)
    GNU readline and history libraries, run-time libraries
  • dep: libstdc++6 (>= 5.2)
    GNU Standard C++ Library v3
  • dep: mothur
    sequence analysis suite for research on microbiota
  • dep: openmpi-bin
    high performance message passing library -- binaries

Download mothur-mpi

Download for all available architectures
Architecture Package Size Installed Size Files
amd64 4,348.9 kB15475 kB [list of files]
i386 4,785.2 kB17718 kB [list of files]